Mining Genomes of Three Marine Sponge-Associated Actinobacterial Isolates for Secondary Metabolism

Horn, Hannes, Hentschel, Ute and Abdelmohsen, Usama Ramadan (2015) Mining Genomes of Three Marine Sponge-Associated Actinobacterial Isolates for Secondary Metabolism Genome Announcements, 3 (5). e01106-15. DOI 10.1128/genomeA.01106-15.

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Abstract

Here, we report the draft genome sequences of three actinobacterial isolates, Micromonospora sp. RV43, Rubrobacter sp. RV113, and Nocardiopsis sp. RV163 that had previously been isolated from Mediterranean sponges. The draft genomes were analyzed for the presence of gene clusters indicative of secondary metabolism using antiSMASH 3.0 and NapDos pipelines. Our findings demonstrated the chemical richness of sponge-associated actinomycetes and the efficacy of genome mining in exploring the genomic potential of sponge-derived actinomycetes.

Document Type: Article
Research affiliation: OceanRep > GEOMAR > FB3 Marine Ecology > FB3-MI Marine Microbiology
Refereed: Yes
DOI etc.: 10.1128/genomeA.01106-15
ISSN: 2169-8287
Date Deposited: 18 Nov 2015 14:56
Last Modified: 11 Apr 2017 10:48
URI: http://eprints.uni-kiel.de/id/eprint/30279

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