Draft genome sequences of three chemically rich actinomycetes isolated from Mediterranean sponges

Horn, Hannes, Cheng, Cheng, Edrada-Ebel, RuAngelie, Hentschel, Ute and Abdelmohsen, Usama Ramadan (2015) Draft genome sequences of three chemically rich actinomycetes isolated from Mediterranean sponges Marine Genomics, 24 (3). pp. 285-287. DOI 10.1016/j.margen.2015.10.003.

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Abstract

Metabolomic analysis has shown the chemical richness of the sponge-associated actinomycetes Streptomyces sp. SBT349, Nonomureae sp. SBT364, and Nocardiopsis sp. SBT366. The genomes of these actinomycetes were sequenced and the genomic potential for secondary metabolism was evaluated. Their draft genomes have sizes of 8.0, 10, and 5.8Mb having 687, 367, and 179 contigs with a GC content of 71.6, 70.7, and 72.7%, respectively. Moreover, antiSMASH 3.0 predicted 108, 149, and 75 secondary metabolite gene clusters, respectively which highlight the metabolic capacity of the three actinomycete species to produce diverse classes of natural products

Document Type: Article
Additional Information: WOS:000367762400027
Keywords: BIOSYNTHETIC GENE CLUSTERS; NATURAL-PRODUCTS; DISCOVERY; DIVERSITY
Research affiliation: OceanRep > GEOMAR > FB3 Marine Ecology > FB3-MI Marine Microbiology
Refereed: Yes
DOI etc.: 10.1016/j.margen.2015.10.003
ISSN: 1874-7787
Projects: SeaBioTech
Date Deposited: 18 Nov 2015 14:43
Last Modified: 11 Apr 2017 08:42
URI: http://eprints.uni-kiel.de/id/eprint/30278

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